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@DiltheyLab DiltheyLab

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    15 repositories

    • RSVTyper

      Public
      Python
      •0•3•0•0•Updated Apr 21, 2026Apr 21, 2026

    • MPore

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 1, 2026Feb 1, 2026

    • GENTRAIN

      Public
      TypeScript
      •
      MIT License
      •0•1•0•0•Updated Jan 20, 2026Jan 20, 2026

    • SARS-CoV-2-GenomicsEnhancedContactTracing-Code

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Jan 5, 2026Jan 5, 2026

    • VaCaHLA

      Public
      Snakemake pipeline to call somatic mutations in the HLA region
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 18, 2025Jun 18, 2025

    • cfCOP

      Public
      Python
      •
      MIT License
      •1•0•0•0•Updated Apr 9, 2025Apr 9, 2025

    • HLA-LA

      Public
      Fast HLA type inference from whole-genome data
      C++
      •
      GNU General Public License v3.0
      •42•145•54•2•Updated Apr 3, 2025Apr 3, 2025

    • graph-genome-workbench

      Public
      Software, workflows and information for working with graph genomes
      Python
      •
      MIT License
      •0•5•0•0•Updated Sep 16, 2024Sep 16, 2024

    • MetaMaps

      Public
      Long-read metagenomic analysis
      Perl
      •
      Other
      •23•111•26•1•Updated Oct 10, 2023Oct 10, 2023

    • MHC-annotation

      Public
      Tools to annotate haplotypes of MHC with gene and transcript information
      Python
      •
      MIT License
      •0•6•4•0•Updated May 11, 2022May 11, 2022

    • SARS-CoV2-Dashboard-Releases

      Public
      Releases of our Dashboard get pushed here automatically
      MIT License
      •0•2•0•0•Updated Feb 19, 2021Feb 19, 2021

    • ContigAnalysisScripts

      Public
      several small python scripts to analyse long read and short read data for scaffolding MHC contigs
      Python
      •
      MIT License
      •0•2•0•0•Updated Nov 27, 2020Nov 27, 2020

    • Teaching

      Public
      0•0•0•0•Updated Jun 30, 2020Jun 30, 2020

    • Immunologie_4410

      Public
      0•0•0•0•Updated Mar 2, 2020Mar 2, 2020

    • SAM2Alignment

      Public
      C++
      •
      MIT License
      •0•3•0•0•Updated Dec 18, 2018Dec 18, 2018
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