nested Patlak and generalized Patlak OSMAPOSL (POSMAPOSL & GPOSMAPOSL) and nested Richardson-Lucy Motion Deconvolution Image Reconstruction (RLMCIR)

.gitattributes

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+*.v     -text -diff
+*.s     -text -diff
+*.scn     -text -diff
+*.sh    eol=lf
+*.jpg   -text -diff
+*.png   -text -diff
+*.gif   -text -diff
+*.pdf   -text -diff
+*.eps   -text -diff

.gitignore

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+# Compiled Object files
+*.slo
+*.lo
+*.o
+*.obj
+
+# Compiled Dynamic libraries
+*.so
+*.dylib
+*.dll
+
+# Compiled Static libraries
+*.lai
+*.la
+*.a
+*.lib
+
+# Compiled Python
+__pycache__/
+*.py[cod]
+
+
+# Executables
+*.exe
+*.out
+*.app
+
+# CMake temporary output
+
+CMakeCache.txt
+CMakeFiles
+cmake_install.cmake
+install_manifest.txt
+
+## Core latex/pdflatex auxiliary files:
+*.aux
+*.lof
+*.log
+*.lot
+*.fls
+*.out
+*.toc
+
+## Intermediate documents:
+*.dvi
+
+## Bibliography auxiliary files (bibtex/biblatex/biber):
+*.bbl
+*.bcf
+*.blg
+*-blx.aux
+*-blx.bib
+*.run.xml
+
+
+# Common editor backups
+~$*
+*~
+*.bak
+
+# Ignore Visual Studio User-specific files
+*.suo
+*.user
+*.sln.docstates
+
+

CMakeLists.txt

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+# This file is part of STIR.
+#
+# This file is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License as published by
+# the Free Software Foundation; either version 2.1 of the License, or
+# (at your option) any later version.
+#
+# This file is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU Lesser General Public License for more details.
+#
+# See STIR/LICENSE.txt for details
+
+# cmake file for building STIR. See the STIR User's Guide and http://www.cmake.org.
+
+# avoid warning about WIN32 no longer defined in CYGWIN
+set(CMAKE_LEGACY_CYGWIN_WIN32 0) 
+
+PROJECT(STIR)
+
+SET_PROPERTY(GLOBAL PROPERTY USE_FOLDERS ON)
+# require 2.8.3 to get FOLDER properties support (without that, we only need cmake 2.6)
+cmake_minimum_required(VERSION 2.8.3)
+
+# add project source to cmake path such that it can use our find_package modules and .cmake files
+set(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/src/cmake)
+
+#### enable support for ctest
+ENABLE_TESTING()
+
+ADD_SUBDIRECTORY(src)
+ADD_SUBDIRECTORY(scripts)

GPL.txt

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+GNU GENERAL PUBLIC LICENSE
+Version 2, June 1991 
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+59 Temple Place - Suite 330, Boston, MA  02111-1307, USA
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