Exploring rate estimation methods in an Ising model of a charge-gated ion channel

More description of the underlying model and code here: ising_sampler.ipynb

See the workshop here: [workshop]

Name		Name	Last commit message	Last commit date
Latest commit History 62 Commits
manuscript		manuscript
workshop		workshop
14 x 14 PMF.xlsx		14 x 14 PMF.xlsx
16 x 16 PMF.xlsx		16 x 16 PMF.xlsx
18 x 18 PMF.xlsx		18 x 18 PMF.xlsx
20 x 20 Ising.xlsx		20 x 20 Ising.xlsx
20 x 20 PMF.xlsx		20 x 20 PMF.xlsx
Ising transition rate problem.pdf		Ising transition rate problem.pdf
IsingSampler.py		IsingSampler.py
IsingTrajectory.py		IsingTrajectory.py
README.md		README.md
Rate constants 20 x 20 T = 30.xlsx		Rate constants 20 x 20 T = 30.xlsx
gmrq_analysis.ipynb		gmrq_analysis.ipynb
ising_production.py		ising_production.py
ising_sampler.ipynb		ising_sampler.ipynb
ising_trajectory.ipynb		ising_trajectory.ipynb
msm_analysis.ipynb		msm_analysis.ipynb
msm_analysis_30C.ipynb		msm_analysis_30C.ipynb
trajectory_analysis.ipynb		trajectory_analysis.ipynb

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