Structure-Aware Large Language Model Improves Prediction of Antibody-Antigen Interaction

This repository contains the code, datasets, and supplementary materials for our paper:

Repository Overview

This repository is organized as follows:

• Classifiers/: Source code for the implementation of the classifiers described in the paper.
• Data/: Processed dataset used in the experiments (or links to download them).
• Analysis/: Precomputed results, plots, or outputs from the experiments.
• Pretrained LLMs/: Code for pretrained LLMs and training.

Dependencies

To run the code in this repository, you will need:

• Python >= 3.10
• Pytorch

Citation

If you use this code or dataset in your research, please cite:

@article{your_paper,
title={Your Paper Title},
author={Your Name and Co-Authors},
journal={Journal/Conference Name},
year={Year},
pages={XX-XX},
doi={DOI Link}
}