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Github repository that goes with the "Lanthipeptide structure prediction and design with Rosetta" manuscript.

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tydingcw/lanthi_modeling_tutorial

 
 

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rosetta_lanthi_pdb_prep/  - preparing a lanthipeptide for modeling in Rosetta
ncaa_params/  - parameterization for lanthipeptide non-canonocal amino acids for use with Rosetta
single_ring_structure_prediction/ - predicting the structure of a lanthipeptide from sequence with scpp
complex_structure_prediction/  - predicting a lanthipeptide structure, requires an input pdb
noe_restraint_data/  - getting all of the noe distance restraint values and scores for a given peptide conformation. 
lanthipeptide_design/  - designing a lanthipeptide

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Github repository that goes with the "Lanthipeptide structure prediction and design with Rosetta" manuscript.

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  • Python 76.0%
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  • Shell 3.4%