Quick perf pass

[benjeffery]

No description provided.

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 100.00%. Comparing base (8eff793) to head (d0ac402).

Additional details and impacted files

@@            Coverage Diff            @@
##              main      #169   +/-   ##
=========================================
  Coverage   100.00%   100.00%           
=========================================
  Files            8         8           
  Lines          351       352    +1     
  Branches        43        43           
=========================================
+ Hits           351       352    +1     

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[jeromekelleher]

Does this make any difference?

[daikitag]

@jeromekelleher The computational speed of tstrait with biobank-scale dataset on the HPC cluster is very slow (the job won't complete after days even though the original code completed in around 10-12 hours) after incorporating the changes in 7ab3653, and I'm now working with @benjeffery to try finding out the issues behind that. I'll let you know if there are any updates on this.

[benjeffery]

Does this make any difference?

About 50% runtime reduction in my (admitedly small-scale) testing.