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tschuelia / PyPythia Public

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Pythia 2.0.0#18

Merged

tschuelia merged 36 commits intomastertschuelia/PyPythia:masterfrom

devtschuelia/PyPythia:devCopy head branch name to clipboard

Mar 5, 2025

Conversation Commits36 (36)Checks Files changed

Merged

Pythia 2.0.0#18
tschuelia merged 36 commits intomasterfrom
dev

Commits

Commits on Dec 29, 2024

wip: gh actions for docs
tschuelia
committed
wrong branch name...
tschuelia
committed
wrong docs version name
tschuelia
committed
please work, I'm hungry
tschuelia
committed
wip: docs for v1
tschuelia
committed
reset docs to current state
tschuelia
committed
more docs
tschuelia
committed
add version flag
tschuelia
committed

Commits on Feb 25, 2025

wip
tschuelia
committed
add licence-files
tschuelia
committed
switch to pyproject.toml
tschuelia
committed
fix python version
tschuelia
committed

Commits on Feb 27, 2025

add repo link to docs
tschuelia
committed
update pre-commit; test coverage
tschuelia
committed
wip: refactoring
tschuelia
committed
more test cases: reduced MSAs
tschuelia
committed
fix test data
tschuelia
committed

Commits on Feb 28, 2025

better parametrize test cases
tschuelia
committed
correctly setup ruff pre-commit; some test refactoring
tschuelia
committed
wip: tests
tschuelia
committed
more error handling + test coverage
tschuelia
committed
handle none prefix
tschuelia
committed
wip: fix gh actions
tschuelia
committed

Commits on Mar 3, 2025

don't extract unused abs rfdist
tschuelia
committed
separate test data for macOS and linux (RAxML-NG yields slightly different results)
tschuelia
committed
rename parse function
tschuelia
committed

Commits on Mar 4, 2025

update gitignore
tschuelia
committed
fix doc references
tschuelia
committed
reintroduce shap command line flag (runtime impact)
tschuelia
committed

Commits on Mar 5, 2025

update usage docs
tschuelia
committed
refactoring
tschuelia
committed
refactoring
tschuelia
committed
refactoring
tschuelia
committed
update docs
tschuelia
committed
update docs
tschuelia
committed
rename package and adjust version retrieval for pypi
tschuelia
committed

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