Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
pipeline annotation nextflow reproducible-research virulence-factor genome-browser genome-analysis rgi virulence-genes mobile-genetic-elements barrnap prophages antimicrobial-genes-annotation methylation-annotation ko-annotation insertion-sequences genomic-islands-prediction prophage-sequences-prediction phigaro rrna-prediction
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Updated
Jan 22, 2026 - Nextflow