orf-finder

Here are 5 public repositories matching this topic...

althonos / pyrodigal

Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!

python bioinformatics genome python-library simd bioconda python-interface metagenomes cython-wrapper prodigal gene-finding orf-finder

Updated Mar 17, 2026
Cython

urmi-21 / orfipy

Star

Fast and flexible ORF finder

python bioinformatics dna protein orf-detection orf-finder codon-tables extract-orfs orf-search

Updated Jan 17, 2022
Python

telatin / porfast

Star

⚡pORFast - Paired-end ORF Fast extraction

bioinformatics ngs fastq paired-end orf-finder

Updated Nov 2, 2021
Nim

Ibrahim-Olajide / ibrahim-olajide.github.io

Star

Variation in Gene caused by Mutation and Alternative Splicing: Identification and Characterization of Pathogenic Variants in TRY, OCA2, HPS-1 and OA1 Genes that leads to Albinism

mutation alignment alternative-splicing blast polymorphism orf-finder

Updated Oct 5, 2023

A rule-based open-reading frame (ORF) prediction tool, built with computation time in mind. Customizable output and search parameters, tested for large datasets and benchmarked for speed and accuracy.

bioinformatics orf-detection open-reading-frame orf-finder orf-search open-reading-frames

Updated Apr 13, 2026
Python

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orf-finder

Here are 5 public repositories matching this topic...

althonos / pyrodigal

urmi-21 / orfipy

telatin / porfast

Ibrahim-Olajide / ibrahim-olajide.github.io

N-ik-o / PORF

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