R package: Evolutionary biology in R

R package to perform sensitivity analysis for comparative methods

Open Software for Teaching Evolutionary Biology at Multiple Scales Through Virtual Inquiries

Perform phylogenetic path analysis in R.

R package for evolutionary mapping of continuous traits

R package: joint models of chromosome number and binary traits

Independently maintained fork of l1ou for detecting evolutionary shifts and convergent regimes in comparative data.

Primitive functions for speeding up elements of a phylogenetic comparative workflow

Supplementary R code for analyses in "Rates of passerine body plan evolution in time and space"

Code and Figures for Souza Ferreira et al.

This directory contains code for the paper A phylogenomic framework for pelagiarian fishes (Acanthomorpha: Percomorpha) highlights mosaic radiation in the open ocean. If you want to run this code, I recommend downloading this code and the data directory from Data Dryad.