CPM implementation in pure JavaScript
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Mar 20, 2026 - JavaScript
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cellular-potts-model
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Repository for `Glassy dynamics using Quantum Computers` Team in Qiskit Hackathon Europe
quantum quantum-computing quantum-chemistry ising-model glass qiskit implementation-of-research-paper condensed-matter-physics cellular-potts-model vqe variational-quantum-eigensolver quantum-chemistry-packages quantum-chemistry-simulation variational-circuit ising-formulations glassy-dynamics 2d-ising glassy-systems longitudinal-fields disordered-phases
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Sep 2, 2022 - Jupyter Notebook
Cellular Potts Model implemented in C++
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Feb 27, 2023 - C++
Proteolytic and non-proteolytic cell migration
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Oct 27, 2018 - Python
de Jong MA, Adegeest E, Bérenger-Currias NMLP, Mircea M, Merks RMH, et al. (2024) The shapes of elongating gastruloids are consistent with convergent extension driven by a combination of active cell crawling and differential adhesion. PLOS Computational Biology 20(2): e1011825. https://doi.org/10.1371/journal.pcbi.1011825
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Nov 6, 2023 - HTML
Modelling of metabolic pathways, cell-based models (Cellular Potts) amongst others
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Jan 17, 2025 - Jupyter Notebook
Simulations of cell competition in ephitelia, using an hybrid Cellular Potts Model. 'Multiscale Mathematical Biology' course.
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Dec 19, 2024 - Python
Compute conversion factors between continuous and discrete perimeters for determining the shape-index. Applicable to the cellular Potts model and other models characterized by discrete densities.
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Sep 15, 2025 - Jupyter Notebook
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