Python Package for the Analysis of Spheroid Microcopy Data
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Updated
Mar 24, 2026 - Python
Python Package for the Analysis of Spheroid Microcopy Data
Designing and automated cell culture system with precise volume control for a streamlined workflow in the Biolabs
This is MATLAB script created and used via the Trinkaus-Randall Lab at Boston University for the analysis of epithelial cellular calcium signaling during wound healing.
🧪 Precision cell passaging from Neubauer counts (viable conc., viability, C1V1=C2V2). PWA offline-ready for the biosafety cabinet.
🧪 PWA for molarity calculations, stock solution prep, and dilution planning in laboratory workflows. Part of the Host Cell Lab Suite.
Researchers use cell calculators in order to plan their experiments. Traditionally, they use excel spreadsheets, but the UI is not necessarily user friendly. It's also difficult to understand. The idea with this cell culture calculator is to give the researcher a 'single finger experience' (think Tinder, Reddit, etc.) to input the values and sel…
A webapp to make visualizing and analyzing CellPathfinder data easier. CellPathfinder is a high content cell image analysis software from Yokogawa. https://terrianl.shinyapps.io/GraphMaster9000/
1st Price Hack'In Saclay 26 - Health Section
BioReact is a Python tool for simulating the dynamics of a Continuous Stirred Tank Bioreactor (CSTR). It uses the Monod model and Runge-Kutta method, with customizable parameters and automated visualizations, ideal for biotechnology research.
🧬 🧫🔬 Browser-based kinetics analysis for CHO fed-batch cultures
📖🔬 🐹 Interactive web application designed to teach and perform the essential calculations used to characterize mammalian cell cultures, specifically focused on CHO cells.
📚⚙️🧪 Interactive platform designed for the dynamic exploration of continuous bioreactors (chemostats).
🧪 Growth kinetics (μ, doubling time, IVCD), qGlc/qGln, and simple feed corrections. Installable PWA for bench-side bioprocess timing.
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