Visualization and structural interpretation of the human BRCA1 protein using PyMOL, including secondary structure analysis, surface topology visualization, and three-dimensional structural exploration.
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Jun 20, 2026
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brca1
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A computational framework utilizing Boolean implication networks to decipher asymmetric regulatory logic in 17q-amplified breast cancer, integrating transcriptomic and epigenomic data under BRCA1 stratification.
bioinformatics systems-biology computational-biology transcriptomics breast-cancer r-stats epigenomics multi-omics boolean-networks tcga-brca chromosome-17q brca1
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Jan 31, 2026 - R
This repository contains an end-to-end tumour-only somatic variant-calling pipeline (GATK Mutect2 + snpEff) for triple-negative breast cancer whole-exome data, focused on BRCA1/BRCA2/TP53, built on Google Colab via Visual Studio Code.
bioinformatics ngs visual-studio-code cancer-genomics multiqc variant-calling somatic-mutations wes bwa-mem whole-exome-sequencing breast-cancer snpeff mutect2 fastqc google-colab gatk4 sra-toolkit tp53 brca2 brca1
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Jul 6, 2026 - HTML
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