Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.
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Updated
Mar 17, 2026 - Python
Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.
A Node.js implementation of the Model Context Protocol (MCP) server for searching and downloading academic papers from multiple sources, including **Web of Science**, arXiv, and more.
LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project
Access and search medRxiv and bioRxiv preprint data
Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.
Monitor biomedical trends visually across ALL of PubMed + bioRxiv
The licensing of bioRxiv preprints
Google's Bard Scientific Publications Extension (supports: arxiv, biorxiv, pubmed, ieeexplore, Sciencedirect, ACM, Nature, Cell)
Annotating Rxiv preprints in an automated fashion
Clean, beautiful Latex template for academic articles
scrape biorxiv in one line of code.
Get Free Copy: A Multi-Repository Search Platform for Biomedical Publications
Does green OA via preprinting reduce Sci-Hub usage?
An integrated set of tools for exploring the oRchard of science 🎈
Flexible query for biorxiv and medRxiv COVID-19 collection
Add a description, image, and links to the biorxiv topic page so that developers can more easily learn about it.
To associate your repository with the biorxiv topic, visit your repo's landing page and select "manage topics."