Ekin-Kahraman / rustscenic Star 11 Code Issues Pull requests Rust and PyO3 implementation of SCENIC-style single-cell regulatory-network analysis. GRN, AUCell, topics, cisTarget, peak calling, cell QC, enhancer-gene links, and eRegulon assembly in one pip install. rust bioinformatics scrna-seq atac-seq single-cell gene-regulatory-network pyo3 scenic scatac-seq pyscenic aucell regulon scenicplus Updated May 19, 2026 Python
Perik-Zavodskii / Visium-Deconvolution-based-clustering Star 0 Code Issues Pull requests Convert your STDeconvolve-generated and EnrichR-decoded topics into Seurat spatial clustering information via AUCell clustering topics 10x-genomics 10xgenomics enrichr visium aucell stdeconvolve visium-analysis Updated Feb 7, 2025 Jupyter Notebook