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Replaces fname char with std::string #4

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Replaces fname char with std::string #4

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Binary file modified dif_cover_scripts/from_unionbed_to_ratio_per_window_CC0
100644 → 100755
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6 changes: 3 additions & 3 deletions dif_cover_scripts/from_unionbed_to_ratio_per_window_CC0.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ int main( int argc , char** argv ) {


int opt, a=1, A=max_cov, b=1, B=max_cov, v=1000, l=0; //!!! Default values for parameters !!!!
char fname[1000], fff[1000];
char fff[1000];

while ((opt = getopt(argc, argv, "a:A:b:B:v:l:")) != -1) {
switch (opt) {
Expand Down Expand Up @@ -54,12 +54,12 @@ int main( int argc , char** argv ) {
exit(EXIT_FAILURE);
}

strncat(fname,argv[optind],strlen(argv[optind]));
std::string fname(argv[optind]);
//printf ("fname=%s\n",fname);

std::ifstream unionbed_file( fname ) ;
if (!unionbed_file) {
fprintf(stderr, "Can't open union.bed file %s\n",fname);
fprintf(stderr, "Can't open union.bed file %s\n",fname.c_str());
exit(EXIT_FAILURE);
}

Expand Down