Popular repositories Loading

1. SKiM SKiM Public

   Serial KinderMiner (or simply SKiM) is general literature-based discovery system for querying all ~30 million PubMed abstracts.

   Python 8 1

2. kinderminer_kg kinderminer_kg Public

   Build a knowledge graph from PubMed abstracts using KinderMiner, Prodigy, and spaCy

   Python 6

3. skimgpt skimgpt Public

   Evaluate hypotheses at scale.

   Python 5 1

4. CHARTS CHARTS Public

   CHARTS: Characterizing Tumor Subpopulations

   Python 3

5. scRNAseq_downstream scRNAseq_downstream Public

   Code for the analysis of the pig retinal organoid data from David Gamm

   Jupyter Notebook 2

6. blue_whale blue_whale Public

   Blue whale project related scripts and small datasets

   R 1