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rectified matrianglify function #3

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rectified matrianglify function #3

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9 changes: 6 additions & 3 deletions ccmpred/substitution_matrices.py
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Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,12 @@
def matrianglify(data, size=20):
""" Make a symmetric size * size matrix out of an array of triangle array data"""
mat = np.zeros((size, size))
mat[np.tril_indices(size)] = data
mat[np.triu_indices(size)] = data

for i in range(size):
for j in range(size):
ind=int(i*(i+1)//2+j)
if (ind<len(data)):
mat[i][j] = data[ind]
mat[j][i] = data[ind]
return mat


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