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12. KBase analysis

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rprops edited this page Sep 13, 2017 · 2 revisions

Import dataKbase

  1. Import genomes after annotation with IMG by downloading the annotation data. You must first convert the .fna and .gff to a new Genbank file (the one provided by IMG is not compatible with Kbase). Use this script to do this. Must have python-anaconda2 and Biopython 1.6 installed.
gff_to_genbank.py file.gff file.fna

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