GitHub - ostratodd/Cypridinidae_Emission: Raw data and analysis files for Bioluminescent Emission Spectra of Cypridinid ostracods

Name		Name	Last commit message	Last commit date
Latest commit History 219 Commits
Final_figures		Final_figures
Luciferase		Luciferase
LuciferaseTree_dNds		LuciferaseTree_dNds
Raw Data		Raw Data
scratch		scratch
.DS_Store		.DS_Store
.Rapp.history		.Rapp.history
.Rhistory		.Rhistory
.gitattributes		.gitattributes
0_Publication_figures.R		0_Publication_figures.R
1_Emission_functions.R		1_Emission_functions.R
2_Read_datasets.R		2_Read_datasets.R
3_Calculate_parameters.R		3_Calculate_parameters.R
4_MutagenesisLuciferase.R		4_MutagenesisLuciferase.R
5_Statistical_tests.R		5_Statistical_tests.R
AncestralAminoAcids.R		AncestralAminoAcids.R
Exploratory_figures.R		Exploratory_figures.R
Figure1.R		Figure1.R
Figure2.R		Figure2.R
Figure3.R		Figure3.R
Figure4.R		Figure4.R
FigureS1.R		FigureS1.R
FigureS2.R		FigureS2.R
FigureS3.R		FigureS3.R
FigureS5.R		FigureS5.R
Figure_S2.tex		Figure_S2.tex
InterestingSites.txt		InterestingSites.txt
Phylomorphospace.R		Phylomorphospace.R
Plotting_functions.R		Plotting_functions.R
Table1.txt		Table1.txt
Table1_phylogenetic_correction.R		Table1_phylogenetic_correction.R
Table2.R		Table2.R
Table2.txt		Table2.txt
Table3.R		Table3.R
Table3.txt		Table3.txt
Table4.R		Table4.R
Table5.R		Table5.R
TableS1.txt		TableS1.txt
TableS2.R		TableS2.R
TableS2.txt		TableS2.txt
TableS3.R		TableS3.R
TableS3.txt		TableS3.txt
TableS4.txt		TableS4.txt
TableS5.txt		TableS5.txt
codonAlignMSA.tex		codonAlignMSA.tex
plotTree.R		plotTree.R