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    12 repositories

    • FlexiDeconv

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 2, 2026May 2, 2026

    • WaviFM

      Public
      Wavelet-based variationally-inferred sparse factor model for spatial transcriptomics data
      C++
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Apr 23, 2026Apr 23, 2026

    • makoview

      Public
      Python
      •0•0•0•0•Updated Apr 8, 2026Apr 8, 2026

    • mako

      Public
      Differential analysis of RNA modifications using Oxford Nanopore Technologies (ONT) direct RNA sequencing data
      Jupyter Notebook
      •0•3•0•0•Updated Apr 8, 2026Apr 8, 2026

    • BLAZE

      Public
      SingleCell Nanopore sequencing data analysis
      Python
      •
      GNU General Public License v3.0
      •10•65•6•1•Updated May 30, 2025May 30, 2025

    • PALAVA

      Public
      Python
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated May 9, 2025May 9, 2025

    • NanoSplicer

      Public
      Python
      •
      GNU General Public License v3.0
      •8•31•8•0•Updated Nov 28, 2024Nov 28, 2024

    • PhyloJumps

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 7, 2024Jun 7, 2024

    • orfHMM

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Sep 21, 2021Sep 21, 2021

    • multiseq

      Public
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jun 28, 2021Jun 28, 2021

    • for-new-members

      Public
      reading list for new members
      0•0•0•0•Updated Jan 13, 2019Jan 13, 2019

    • hpc-workshop

      Public
      18/10/2018 workshop on how to use spartan and slurm
      Shell
      •0•0•0•0•Updated Oct 18, 2018Oct 18, 2018
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