Repositories list

• VFBquery

  Public
  A high-performance Python library providing optimized programmatic access to the VirtualFlyBrain knowledge graph, with 54,000x faster queries through intelligen…

  Python

  •

  Apache License 2.0

  •00 forks•00 stars•44 issues•00 pull requests•Updated Apr 20, 2026Apr 20, 2026

• vfb-driver-ontology

  Public
  Makefile

  •

  Creative Commons Attribution 4.0 International

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 20, 2026Apr 20, 2026

• VFB_reporting_results

  Public
  Repository containing the results of various data change and consistency checking.

  Python

  •00 forks•11 star•22 issues•00 pull requests•Updated Apr 20, 2026Apr 20, 2026

• curation

  Public

  VirtualFlyBrain/curation’s past year of commit activity
  A repository of records specifying curation into the VFB Knowledge Base

  Python

  •00 forks•00 stars•2222 issues•99 pull requests•Updated Apr 19, 2026Apr 19, 2026

• vfb-neurotransmitter-predictions

  Public

  VirtualFlyBrain/vfb-neurotransmitter-predictions’s past year of commit activity
  Neurotransmitter predictions and confidence values for VFB individuals. Data taken from neuprint.

  Makefile

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 17, 2026Apr 17, 2026

• vfb-scRNAseq-gene-annotations

  Public
  Makefile

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 17, 2026Apr 17, 2026

• vfb-EPseq-ontology

  Public
  Makefile

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 17, 2026Apr 17, 2026

• vfb-scRNAseq-ontology

  Public
  An ontology of Drosophila melanogaster scRNAseq data pulled from FlyBase.

  Makefile

  •00 forks•00 stars•11 issue•00 pull requests•Updated Apr 17, 2026Apr 17, 2026

• vfb-extension-ontology

  Public
  A small application ontology used by VFB.

  Makefile

  •

  Creative Commons Attribution 4.0 International

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 17, 2026Apr 17, 2026

• VFB3-MCP

  Public

  VirtualFlyBrain/VFB3-MCP’s past year of commit activity
  Explore Virtual Fly Brain data directly through your favourite LLM with the new VFB Model Context Protocol (MCP) tool

  mcpdrosophila-melanogastermcp-server

  mcpdrosophila-melanogastermcp-server

  TypeScript

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Apr 16, 2026Apr 16, 2026

• geppetto-vfb

  Public
  VFB (v2) application

  JavaScript

  •

  Other

  •33 forks•77 stars•6666 issues•4141 pull requests•Updated Apr 10, 2026Apr 10, 2026

• vfb-solr

  Public
  Solr config for the Virtual Fly Brain

  Dockerfile

  •00 forks•00 stars•11 issue•00 pull requests•Updated Apr 9, 2026Apr 9, 2026

• vfb-pipeline-collectdata

  Public
  Shell

  •

  Apache License 2.0

  •00 forks•00 stars•88 issues•11 pull request•Updated Mar 31, 2026Mar 31, 2026

• imageFileConvertion

  Public
  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 31, 2026Mar 31, 2026

• VFB2

  Public
  Virtual Fly Brain Documentation Site

  Python

  •

  MIT License

  •55 forks•1111 stars•171171 issues•00 pull requests•Updated Mar 31, 2026Mar 31, 2026

• VFBchat

  Public
  VFBchat client

  JavaScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 30, 2026Mar 30, 2026

• owl_cache

  Public
  a pre-caching and refresh sever to sit in front of owlery to speed up slow queries

  Shell

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 26, 2026Mar 26, 2026

• Docker-VFB-Neo4j-ProductionDB

  Public
  Neo4j server loaded with the VFB Production DB

  Dockerfile

  •11 fork•00 stars•00 issues•00 pull requests•Updated Mar 23, 2026Mar 23, 2026

• owlery-cache-reload

  Public
  Preload all VFB owlery queries

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 21, 2026Mar 21, 2026

• VFB_connect

  Public
  A library for querying VFB servers (neo4j, owlery, solr)

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •11 fork•55 stars•2929 issues•5353 pull requests•Updated Mar 19, 2026Mar 19, 2026

• ask-vfb

  Public
  Python

  •11 fork•11 star•11 issue•00 pull requests•Updated Mar 18, 2026Mar 18, 2026

• vfb-pipeline-polishing

  Public
  Final cypher steps after complete pipeline load

  Python

  •

  MIT License

  •00 forks•00 stars•11 issue•00 pull requests•Updated Mar 13, 2026Mar 13, 2026

• VFB_reporting

  Public
  Scripts for reporting on the state of VFB content and pipeline

  Jupyter Notebook

  •00 forks•00 stars•1010 issues•1111 pull requests•Updated Mar 13, 2026Mar 13, 2026

• VFB_connectomics_import

  Public
  A project to produce RDF/OWL representations of connectomics data for import to the VFB integration layer triple store.

  Python

  •00 forks•00 stars•44 issues•1616 pull requests•Updated Mar 11, 2026Mar 11, 2026

• uk.ac.vfb.geppetto

  Public
  Virtual Fly Brain geppetto code

  Java

  •

  Other

  •11 fork•00 stars•1212 issues•1717 pull requests•Updated Mar 10, 2026Mar 10, 2026

• vfb-pipeline-dumps

  Public
  Pipeline that creates dumps from the triplestore for consumption by the downstream services

  Python

  •

  Apache License 2.0

  •00 forks•00 stars•1313 issues•22 pull requests•Updated Feb 23, 2026Feb 23, 2026

• vfb_expression_annotator

  Public
  VFB Expression Annotator tags classes based on the VFB clas expression config

  Java

  •00 forks•00 stars•00 issues•2525 pull requests•Updated Feb 23, 2026Feb 23, 2026

• vfb-prod

  Public
  Shell

  •

  Apache License 2.0

  •00 forks•00 stars•22 issues•00 pull requests•Updated Feb 22, 2026Feb 22, 2026

• vfb-neuron-functions

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 20, 2026Feb 20, 2026

• org.geppetto.frontend

  Public
  Geppetto frontend bundle (Web Application)

  JavaScript

  •

  Other

  •2424 forks•00 stars•00 issues•3838 pull requests•Updated Feb 15, 2026Feb 15, 2026