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    6 repositories

    • sigray_lab_website

      Public
      Website for Pontus Plavén Sigray's research group
      HTML
      •
      MIT License
      •0•0•0•0•Updated Mar 15, 2026Mar 15, 2026

    • CSF-Panel-Discovery

      Public
      CSF autophagy/lysosome biomarker panel discovery pipeline - 13 datasets, ~9,500 proteins scored, translational mouse↔human
      Python
      •0•0•0•0•Updated Mar 14, 2026Mar 14, 2026

    • ERAP-periodontal-analysis

      Public
      FDG-PET/MRI analysis pipeline for quantifying periodontal inflammation in the ERAP clinical trial
      Python
      •0•0•0•0•Updated Mar 3, 2026Mar 3, 2026

    • pet-idif-pipeline

      Public
      Dynamic PET imaging pipeline: DICOM to NIfTI, brain segmentation, TAC extraction, SUV/%ID, IDIF, and kinetic modeling (Patlak, Logan, 1/2TCM)
      Python
      •0•0•0•0•Updated Mar 2, 2026Mar 2, 2026

    • ERAP-ONH-analysis

      Public
      FDG-PET quantification pipeline for optic nerve head (ONH) analysis in the ERAP clinical trial
      Python
      •0•0•0•0•Updated Feb 28, 2026Feb 28, 2026

    • ERAP-BMD-muscle-analysis

      Public
      CT analysis pipeline for bone mineral density, muscle composition, and adipose tissue from the ERAP clinical trial
      Python
      •0•0•0•0•Updated Feb 28, 2026Feb 28, 2026
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