PanKbase
Change the repository type filter
All
Repositories list
31 repositories
igvf-ui
PublicThe Next.js-based UI portion of IGVF-DACC that works with igvfdEasy_CM
PublicEasyDE
Publicigvfd
PublicMetadata database for IGVF projectshared-infrastructure
PublicReusable or common CDK piecessnovault
PublicThe SnoVault general purpose hybrid object-relational databasecdk-igvf-prod
PublicRepo for internal infrastructure in igvf-prod accountpankbase-python-client
PublicAutogenerated Python client for the IGVF API.github
Publicdig-dug-portal
PublicPanKbase site (https://pankbase.org)snRNAseq-NextFlow
PublicPanKbase-scRNA-seq
PublicCollection of code and documentation to replicate islet single cell map on PanKbase.PanKbase-donor-summary
PublicShiny app for PanKbase Donor Summary ToolPanKgraph-finemap-coloc
PublicCollection of code and documentation to conduct fine-mapping and colocalization analysis for PanKbase and PanKgraph.PanKbase-DEG-analysis
PublicCollection of code and documentation to replicate islet DEG analysis on PanKbase.external-feedback
PublicHPAP-scATAC-seq
Publicdig-aggregator-methods
PublicMonorepo of methods implemented for the Aggregator- Autogenerated OpenAPI specification used by IGVF clients
cdk-igvf-sandbox
PublicRepo for internal infrastructure in igvf-sandbox (igvf-staging) accountcdk-igvf-staging
PublicRepo for internal infrastructure in igvf-staging accountcdk-igvf-dev
PublicRepo for internal infrastructure in igvf-dev accountwrangler-tools
Publicdig-bioindex
PublicBIO index for genetic records stored in S3 and FastAPI server.gtex-pipeline
PublicGTEx & TOPMed data production and analysis pipelinesontology
PublicThe script is used to update the ontology versions used for searching and validation in IGVF project.
ProTip! When viewing an organization's repositories, you can use the
props. filter to filter by custom property.