List view

[Feature]: Mean recruitment adjustment

benchmark - MSY

in progressThis is being worked on in a branchThis is being worked on in a branch

recruitment

Status: Open.

#594 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Apr 26, 2024

[Refactor]: Dynamic spawner-recruitment logic in benchmarks and projections

Epic: Equilibrium calcsGroups together issues/user stories releated to equilibrium calculationsGroups together issues/user stories releated to equilibrium calculations

on hold

recruitment

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#36 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: Equilibrium growth for equilibrium calculations

benchmark - MSY

Epic: Equilibrium calcsGroups together issues/user stories releated to equilibrium calculationsGroups together issues/user stories releated to equilibrium calculations

hardsubstantial (days-weeks) worksubstantial (days-weeks) work

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#58 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: Add generalized gamma index likelihood

statisticsrelated to logLrelated to logL

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#497 In nmfs-ost/ss3-source-code;

· Cole-Monnahan-NOAA opened on Aug 18, 2023

[Feature]: dedicated option for timesteps as continuous seasons

misc. input

recruitment

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

Feature

#660 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Mar 17, 2025

[Feature]: Implement calculation of effective degrees of freedom

in progressThis is being worked on in a branchThis is being worked on in a branch

new requestinitial entry of a new requestinitial entry of a new request

statisticsrelated to logLrelated to logL

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

Feature

#651 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Jan 13, 2025

[Feature]: Develop design matrix approach to share movement parameters

area & movement

Epic: Improve movementGroup of issues/user stories to improve movement in SS3Group of issues/user stories to improve movement in SS3

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#60 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: Multivariate-Tweedie for age/length compositional likelihood

composition

Epic: Data weighting improvementGroup of issues/user stories related to improving data weightingGroup of issues/user stories related to improving data weighting

FIMSIdeas/issues worth considering for FIMS, including ideas/issues that won't be incorporated into SS3.Ideas/issues worth considering for FIMS, including ideas/issues that won't be incorporated into SS3.

in progressThis is being worked on in a branchThis is being worked on in a branch

statisticsrelated to logLrelated to logL

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#266 In nmfs-ost/ss3-source-code;

· James-Thorson-NOAA opened on Mar 7, 2022

review implementation of parameter random effects

Epic: Improve parametersGroup of issues related to improving parameter featuresGroup of issues related to improving parameter features

essay topicsuggest for essay topicsuggest for essay topic

needs testingissue has been resolved and needs testingissue has been resolved and needs testing

time-vary parm

Status: Open.

#20 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: Add capability for seasonal offset in a CPUE catchability

new requestinitial entry of a new requestinitial entry of a new request

time-vary parm

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#481 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Jul 21, 2023

[Feature]: Add age range option to 2DAR selectivity

new requestinitial entry of a new requestinitial entry of a new request

selectivity

Status: Open.

#461 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Jun 2, 2023

[Feature]: Input prior on derived selectivity

Epic: Improve parametersGroup of issues related to improving parameter featuresGroup of issues related to improving parameter features

selectivity

statisticsrelated to logLrelated to logL

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#13 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: Movement is fxn of mean length-at-age

area & movement

Epic: Improve movementGroup of issues/user stories to improve movement in SS3Group of issues/user stories to improve movement in SS3

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#49 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: Year-specific MSY

benchmark - MSY

Epic: Improve bmarks/fcastGroup of issues/user stories to improve benchmarks and forecasting calcsGroup of issues/user stories to improve benchmarks and forecasting calcs

hardsubstantial (days-weeks) worksubstantial (days-weeks) work

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#3 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: Report more info on deviations to PARAMETERS section of Report.sso

Epic: Improve parametersGroup of issues related to improving parameter featuresGroup of issues related to improving parameter features

misc. output

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#8 In nmfs-ost/ss3-source-code;

· k-doering-NOAA opened on Nov 5, 2020

[Feature]: update dynamic Bzero to work with recdev options 3&4

misc. internal calc

recruitment

Status: Open.

#507 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Sep 26, 2023

[Bug]: crash when do_recdev = 0 is combined with SRR option 7 (but work-around is available)

recruitment

Status: Open.

#560 In nmfs-ost/ss3-source-code;

· iantaylor-NOAA opened on Feb 1, 2024

[Refactor]: DM for age discard

discard & retention

Status: Open.

#573 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Feb 22, 2024

[Feature]: add discard body weights to wtatage.ss

discard & retention

duplicateThis issue or pull request already existsThis issue or pull request already exists

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#575 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Feb 27, 2024

[Refactor]: create function for t=f(y,s)

misc. internal calc

quickfew hours workfew hours work

Status: Open.

#578 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Mar 11, 2024

[Feature]: Revise recdev_bias adjustment to be a customizable list of line segments

recruitment

Status: Open.

#588 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Apr 17, 2024

[Feature]: Cohort growth deviation added to Linf (or L2)

EPIC:GROWTH_M25

growth

wishlistrequest new feature; bigger than revision; OK to remove after adding to Milestonerequest new feature; bigger than revision; OK to remove after adding to Milestone

Status: Open.

#599 In nmfs-ost/ss3-source-code;

· peterkuriyama-NOAA opened on May 14, 2024

[Feature]: mean vs median recruitment when using SCAA option

recruitment

Status: Open.

#696 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Jul 31, 2025

[Feature]: Create a basic report list that could serve as better starting configuration for customization

misc. output

Status: Open.

#723 In nmfs-ost/ss3-source-code;

· Rick-Methot-NOAA opened on Sep 9, 2025

[Feature]: Add standard errors for area-specific quantities

area & movement

Status: Open.

Feature

#731 In nmfs-ost/ss3-source-code;

· e-perl-NOAA opened on Sep 16, 2025