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nf-core / eager Public

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Fork 88
Star 203

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Issues 49
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[DSL2] Classify Human mtDNA Haplogroup#1148

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trianglegrrl wants to merge 11 commits intodevnf-core/eager:devfrom

dsl2-haplogrep3-cleannf-core/eager:dsl2-haplogrep3-cleanCopy head branch name to clipboard

Conversation Commits11 (11)Checks Files changed

Open

[DSL2] Classify Human mtDNA Haplogroup#1148
trianglegrrl wants to merge 11 commits intodevfrom
dsl2-haplogrep3-clean

Commits

Commits on May 23, 2025

WIP
VerbalCant
committed
Stop being so abstracty
VerbalCant
committed
Add haplogrep3 classify @3.2.2 (nf-core module)
VerbalCant
committed
TODO: This is an upstream bug/regression, right?
VerbalCant
committed
Rename to CLASSIFY_MTDNA_HAPLOGROUP
VerbalCant
committed
Rename command line option to `run_mtdna_haplogroup_classification`
VerbalCant
committed
Fix linter error
VerbalCant
committed
Update docs with working examples for manual testing
VerbalCant
committed
Remove markdownlint and prettier processing for
VerbalCant
committed
Pass phylotree through to haplogrep3 module
VerbalCant
committed
Update testing docs with new params
VerbalCant
committed

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