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Add GTDB-Tk classification to bacass workflow#286

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albatalavera wants to merge 2 commits intonf-core:devfrom
albatalavera:dev
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Add GTDB-Tk classification to bacass workflow#286
albatalavera wants to merge 2 commits intonf-core:devfrom
albatalavera:dev

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@albatalavera
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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/bacass branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

@nf-core-bot
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Warning

Newer version of the nf-core template is available.

Your pipeline is using an old version of the nf-core template: 3.5.1.
Please update your pipeline to the latest version.

For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation.

@Daniel-VM Daniel-VM changed the title Dev GTDB-Tk classification to bacass workflow Mar 16, 2026
@Daniel-VM Daniel-VM changed the title GTDB-Tk classification to bacass workflow Add GTDB-Tk classification to bacass workflow Mar 16, 2026
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