Releases: mmb-irb/MDDB-workflow
Releases · mmb-irb/MDDB-workflow
v0.1.10
v0.1.9
Added
- Add dataset summary, status, scan, inputs, and remove workflow commands
- Add project and MD log links in dataset views
- Add waiting state handling for SLURM jobs
- Add membrane analysis support for united-atom and coarse-grained systems
Changed
- Refactor dataset storage around SQLite-backed projects and MD entries
- Update dataset behavior to overwrite entries with the same
rel_pathby default and hide UUIDs inshow - Improve topology, ligand, and reference handling, including missing bonds, dummy atoms, and lipid/PubChem lookups
- Improve workflow task naming, task tracking, and error handling across the console
- Switch PDB trajectory handling to PyTraj to reduce memory usage
Fixed
- Fix dataset summaries, empty MD inputs, and inconsistent input handling
- Fix SAS and solvent handling in structure and screenshot generation
- Fix ligand and reference edge cases, including null Mordred values and missing PubChem mappings
- Fix runtime robustness issues around retries, timeouts, multiprocessing, and database locking