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celltool

Fork from https://github.com/zpincus/celltool/tree/master. See here on how to use.

Installation

To install:

conda create -y -n py39 python=3.9
conda activate py39
pip install matplotlib numpy scipy imageio
pip install scikit-image
pip install git+https://github.com/maschka/celltool

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Command-line tools for statistical analysis of shapes, particularly cell shapes from micrographs.

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  • Python 100.0%