Email: l.taylor@bowdoin.edu
Bluesky: @liamtaylor.bsky.social
Website: https://ltaylor.mmm.page/
Computational model system for analyzing the behavior and reproduction of seabird pair-bonds. Currently hosts code analyzing the energetics and schedules of two storm-petrel parents and an egg across the incubation season. Currently parameterized for Leach's Storm-Petrels (Hydrobates leucorhous) in the northwest Atlantic.
The C++ source code is compiled in src/ with make
In the src/ directory, run the compiled program with ./lhsp
Important user/testing settings are found at the top of src/main.cpp
Simulation output (big file) is written to Output/ directory
An example slurm script (for running simulations on HPC) is provided in lhsp.sh
Process the simulation output in chunks with R/process_simulation_results.r
Processed output is written as a separate file (Output/processed_results.csv)
Analyze results with R/analysis.r
Descriptive statistics logged in Output/
Plot images saved to Plots