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Dockerfile is broken/outdated: runtime install requires bngsim (no Linux wheel) and bundles only legacy BNG2.pl

bugSomething isn't workingSomething isn't working

Status: Open.

#414 In lanl/PyBNF;

· wshlavacek opened on Jun 7, 2026

Separate the initialization distribution from the prior (PyBNF conflates objective prior and start-point sampling)

Status: Open.

#413 In lanl/PyBNF;

· wshlavacek opened on Jun 7, 2026

Centralize the θ↔u scale transform: ~12 algorithm sites inline base-10 (np.log10/10**/exp10) instead of routing through Scale (ADR-0010 drift)

Status: Open.

#412 In lanl/PyBNF;

· wshlavacek opened on Jun 7, 2026

Truncated/bounded priors: allow reflecting bounds on unbounded-support families (Normal/Laplace/log-*) (PEtab v2 prerequisite)

Status: Open.

#411 In lanl/PyBNF;

· wshlavacek opened on Jun 7, 2026

Per-observable noise models: lift the single global objfunc to per-observable selection (PEtab v2 prerequisite)

Status: Open.

#410 In lanl/PyBNF;

· wshlavacek opened on Jun 7, 2026

PEtab v2 problem importer — the 'two-adapter' proof (first step: parameters table → FreeParameter/Prior)

Status: Open.

#407 In lanl/PyBNF;

· wshlavacek opened on Jun 6, 2026

Replace fixed 10-second waits during distributed-cluster startup and shutdown with real readiness checks

Status: Open.

#398 In lanl/PyBNF;

· wshlavacek opened on May 31, 2026

Add example notebooks demonstrating end-to-end fitting workflows

Status: Open.

#387 In lanl/PyBNF;

· wshlavacek opened on May 15, 2026

Pluggable optimizer protocol with scipy wrappers for gradient-based methods

Status: Open.

#386 In lanl/PyBNF;

· wshlavacek opened on May 15, 2026

Gradient plumbing: surface objective gradients via the BNGsim backend

Status: Open.

#385 In lanl/PyBNF;

· wshlavacek opened on May 15, 2026

Validate representative PyBNF examples against the BNGsim default path

Status: Open.

#380 In lanl/PyBNF;

· wshlavacek opened on May 5, 2026

Feature request: Kalman-inspired proposals (DREAM-KZS)

Status: Open.

#358 In lanl/PyBNF;

· wshlavacek opened on Mar 27, 2026