Updating dependencies and adding in an entity_x_source_file table

.github/workflows/deploy-docs.yaml

@@ -1,29 +1,27 @@
 ---
-  name: Auto-deployment of Schema Documentation
-  on:
-    push:
-      branches: [main]
-  jobs:
-    build-docs:
-      runs-on: ubuntu-latest
-      permissions:
-        contents: write
-        pull-requests: write
-      steps:
-        - name: Checkout
-          uses: actions/checkout@main
-          with:
-              fetch-depth: 0
+name: Auto-deployment of Schema Documentation
+on:
+  push:
+    branches: [main]
+jobs:
+  build-docs:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+      pull-requests: write
+    steps:
+      - name: Checkout
+        uses: actions/checkout@main
 
-        - name: Set up Python 3.
-          uses: actions/setup-python@main
-          with:
-            python-version: 3.13
+      - name: Set up Python 3.
+        uses: actions/setup-python@main
+        with:
+          python-version: 3.13
 
-        - name: Install uv
-          uses: astral-sh/setup-uv@v7
+      - name: Install uv
+        uses: astral-sh/setup-uv@v7
 
-        - name: Build documentation.
-          run: |
-              uv sync
-              make gendoc-gh
+      - name: Build documentation.
+        run: |
+          uv sync
+          make gendoc-gh

pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "cdm-schema"
-version = "0.1.1"
+version = "0.1.2"
 description = "CDM Schema repo"
 readme = "README.md"
 requires-python = ">=3.13"
@@ -9,12 +9,12 @@ authors = [
 ]
 
 dependencies = [
-    "linkml>=1.9.6",
-    "linkml-runtime>=1.9.5",
-    "mkdocs-material>=9.7.1",
+    "linkml>=1.10.0",
+    "linkml-runtime>=1.10.0",
+    "mkdocs-material>=9.7.6",
     "mkdocs-mermaid2-plugin>=1.2.3",
     "pyspark>=4.1.1",
-    "ruff>=0.15.1",
+    "ruff>=0.15.8",
 ]
 
 [build-system]