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19 changes: 19 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -11,6 +11,10 @@ Repo for CDM input data loading and wrangling
- [Tests](#tests)
- [Loading genomes, contigs, and features](#loading-genomes-contigs-and-features)
- [Running bbmap stats and checkm2 on genome or contigset files](#running-bbmap-stats-and-checkm2-on-genome-or-contigset-files)
- [Changelog](#changelog)
- [v0.1.2](#v012)
- [v0.1.1](#v011)
- [v0.1.0](#v010)



Expand Down Expand Up @@ -159,3 +163,18 @@ Run the stats and checkm2 tools with the following command:
bash scripts/run_tools.sh path/to/genome_paths_file.json output_dir
```
where `path/to/genome_paths_file.json` specifies the path to the genome paths file (format specified above) and `output_dir` is the directory for the results.


## Changelog

### v0.1.2

- Update XML File Splitter to use the latest version, which includes the `gzip` parameter.

### v0.1.1

- Add [XML File Splitter](https://github.com/ialarmedalien/xml_file_splitter) to the container.

### v0.1.0

- Initial release.
2 changes: 1 addition & 1 deletion pyproject.toml
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@@ -1,6 +1,6 @@
[project]
name = "cdm-data-loaders"
version = "0.1.0"
version = "0.1.2"
description = "Data loaders and wranglers for the CDM."
requires-python = ">= 3.13"
readme = "README.md"
Expand Down
2 changes: 1 addition & 1 deletion uv.lock

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