Refseq parser draft #68
+1,714
−2,885
Open
Codecov / codecov/project
failed
Jan 20, 2026 in 1s
18.30% (-26.63%) compared to 72fa98f
View this Pull Request on Codecov
18.30% (-26.63%) compared to 72fa98f
Details
Codecov Report
❌ Patch coverage is 78.23834% with 42 lines in your changes missing coverage. Please review.
✅ Project coverage is 18.30%. Comparing base (72fa98f) to head (7c69ad5).
| Files with missing lines | Patch % | Lines |
|---|---|---|
| .../cdm_data_loader_utils/parsers/annotation_parse.py | 79.25% | 39 Missing |
| src/cdm_data_loader_utils/parsers/uniref.py | 0.00% | 3 Missing |
Additional details and impacted files
@@ Coverage Diff @@
## uniprot-refactor-v2 #68 +/- ##
========================================================
- Coverage 44.92% 18.30% -26.63%
========================================================
Files 44 46 +2
Lines 2767 2956 +189
========================================================
- Hits 1243 541 -702
- Misses 1524 2415 +891 | Files with missing lines | Coverage Δ | |
|---|---|---|
| ...cdm_data_loader_utils/parsers/kbase_cdm_pyspark.py | 100.00% <100.00%> (ø) |
|
| src/cdm_data_loader_utils/parsers/uniref.py | 0.00% <0.00%> (-55.19%) |
⬇️ |
| .../cdm_data_loader_utils/parsers/annotation_parse.py | 79.25% <79.25%> (ø) |
... and 14 files with indirect coverage changes
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