UniProt Parser Refactor – Improved Modularity, Identifier Extraction, and Test Coverage #45
Codecov / codecov/project
succeeded
Jan 20, 2026 in 0s
44.92% (+1.13%) compared to b3d8269
View this Pull Request on Codecov
44.92% (+1.13%) compared to b3d8269
Details
Codecov Report
❌ Patch coverage is 56.22407% with 211 lines in your changes missing coverage. Please review.
✅ Project coverage is 44.92%. Comparing base (b3d8269) to head (72fa98f).
Additional details and impacted files
@@ Coverage Diff @@
## develop #45 +/- ##
===========================================
+ Coverage 43.78% 44.92% +1.13%
===========================================
Files 42 44 +2
Lines 2592 2767 +175
===========================================
+ Hits 1135 1243 +108
- Misses 1457 1524 +67 | Files with missing lines | Coverage Δ | |
|---|---|---|
| ...data_loader_utils/parsers/gene_association_file.py | 62.06% <0.00%> (ø) |
|
| ...dm_data_loader_utils/parsers/shared_identifiers.py | 88.88% <88.88%> (ø) |
|
| src/cdm_data_loader_utils/parsers/xml_utils.py | 80.35% <80.35%> (ø) |
|
| src/cdm_data_loader_utils/parsers/uniref.py | 55.18% <60.00%> (+13.47%) |
⬆️ |
| src/cdm_data_loader_utils/parsers/uniprot.py | 49.46% <48.75%> (-7.73%) |
⬇️ |
Continue to review full report in Codecov by Sentry.
Legend - Click here to learn more
Δ = absolute <relative> (impact),ø = not affected,? = missing data
Powered by Codecov. Last update dd0c28e...72fa98f. Read the comment docs.
🚀 New features to boost your workflow:
- ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.
Loading