Skip to content

Moving download location of the image_cube example #41

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
unbohn merged 2 commits into from
Feb 23, 2026
Merged

Moving download location of the image_cube example #41

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
87e1863
Changing template location of image_cube
evan-greenbrg Feb 2, 2026
2f0a611
added image cube references in notebook
evan-greenbrg Feb 6, 2026
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
36 changes: 18 additions & 18 deletions docs/notebooks/apply_oe.ipynb
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -51,11 +51,11 @@
"\n",
"The script is run via the CLI. For example:\n",
"\n",
"> `IC=$(isofit path imagecube)` sets the environment variable `IC` to the output of the command `isofit path imagecube`. This is just used to reuse the same output for multiple arguments.\n",
"> `IC=$(isofit path examples)/image_cube/small` sets the environment variable `IC` to the output of the command `isofit path examples/image_cube/small`. This is just used to reuse the same output for multiple arguments.\n",
"> Depending on the user's isofit installation environment, this path may vary. This command ensures the correct path is retrieved\n",
"\n",
"```bash\n",
" IC=$(isofit path imagecube)/small EX=$(isofit path examples)/image_cube/small \\\n",
" IC=$(isofit path examples)/image_cube/small EX=$(isofit path examples)/image_cube/small \\\n",
" isofit apply_oe \\\n",
" $IC/ang20170323t202244_rdn_7000-7010 \\\n",
" $IC/ang20170323t202244_loc_7000-7010 \\\n",
Expand Down Expand Up @@ -114,9 +114,9 @@
" shutil.rmtree(o)\n",
"\n",
"apply_oe(\n",
" input_radiance = str(env.path(\"imagecube\", \"small\", \"ang20170323t202244_rdn_7000-7010\")),\n",
" input_loc = str(env.path(\"imagecube\", \"small\", \"ang20170323t202244_loc_7000-7010\")),\n",
" input_obs = str(env.path(\"imagecube\", \"small\", \"ang20170323t202244_obs_7000-7010\")),\n",
" input_radiance = str(env.path(\"examples\", \"image_cube\", \"small\", \"ang20170323t202244_rdn_7000-7010\")),\n",
" input_loc = str(env.path(\"examples\", \"image_cube\", \"small\", \"ang20170323t202244_loc_7000-7010\")),\n",
" input_obs = str(env.path(\"examples\", \"image_cube\", \"small\", \"ang20170323t202244_obs_7000-7010\")),\n",
" working_directory = str(output),\n",
" sensor = \"ang\",\n",
" surface_path = str(env.path(\"examples\", \"image_cube\", \"small\", \"configs\", \"surface.json\")),\n",
Expand Down Expand Up @@ -161,9 +161,9 @@
"outputs": [],
"source": [
"# Load the input files\n",
"rdn_path = env.path(\"imagecube\", \"small\", \"ang20170323t202244_rdn_7000-7010\")\n",
"loc_path = env.path(\"imagecube\", \"small\", \"ang20170323t202244_loc_7000-7010\")\n",
"obs_path = env.path(\"imagecube\", \"small\", \"ang20170323t202244_obs_7000-7010\")\n",
"rdn_path = env.path(\"examples\", \"image_cube\", \"small\", \"ang20170323t202244_rdn_7000-7010\")\n",
"loc_path = env.path(\"examples\", \"image_cube\", \"small\", \"ang20170323t202244_loc_7000-7010\")\n",
"obs_path = env.path(\"examples\", \"image_cube\", \"small\", \"ang20170323t202244_obs_7000-7010\")\n",
"\n",
"rdn = envi.open(envi_header(str(rdn_path)))\n",
"loc = envi.open(envi_header(str(loc_path)))\n",
Expand Down Expand Up @@ -300,7 +300,7 @@
"See the following CLI call to run Apply OE with the analytical line algorithm:\n",
"\n",
"```bash\n",
" IC=$(isofit path imagecube)/medium EX=$(isofit path examples)/image_cube/medium \\\n",
" IC=$(isofit path examples)/image_cube/medium EX=$(isofit path examples)/image_cube/medium \\\n",
" isofit apply_oe \\\n",
" $IC/ang20170323t202244_rdn_7k-8k \\\n",
" $IC/ang20170323t202244_loc_7k-8k \\\n",
Expand Down Expand Up @@ -353,9 +353,9 @@
" shutil.rmtree(o)\n",
"\n",
"apply_oe(\n",
" input_radiance = str(env.path(\"imagecube\", \"medium\", \"ang20170323t202244_rdn_7k-8k\")),\n",
" input_loc = str(env.path(\"imagecube\", \"medium\", \"ang20170323t202244_loc_7k-8k\")),\n",
" input_obs = str(env.path(\"imagecube\", \"medium\", \"ang20170323t202244_obs_7k-8k\")),\n",
" input_radiance = str(env.path(\"examples\", \"image_cube\", \"medium\", \"ang20170323t202244_rdn_7000-7010\")),\n",
" input_loc = str(env.path(\"examples\", \"image_cube\", \"medium\", \"ang20170323t202244_loc_7000-7010\")),\n",
" input_obs = str(env.path(\"examples\", \"image_cube\", \"medium\", \"ang20170323t202244_obs_7000-7010\")),\n",
" working_directory = str(output),\n",
" sensor = \"ang\",\n",
" surface_path = str(env.path(\"examples\", \"image_cube\", \"medium\", \"configs\", \"surface.json\")),\n",
Expand Down Expand Up @@ -425,9 +425,9 @@
"outputs": [],
"source": [
"# Plotting the input data\n",
"rdn_path = env.path(\"imagecube\", \"medium\", \"ang20170323t202244_rdn_7k-8k\")\n",
"loc_path = env.path(\"imagecube\", \"medium\", \"ang20170323t202244_loc_7k-8k\")\n",
"obs_path = env.path(\"imagecube\", \"medium\", \"ang20170323t202244_obs_7k-8k\")\n",
"rdn_path = env.path(\"examples\", \"image_cube\", \"medium\", \"ang20170323t202244_rdn_7000-7010\")\n",
"loc_path = env.path(\"examples\", \"image_cube\", \"medium\", \"ang20170323t202244_loc_7000-7010\")\n",
"obs_path = env.path(\"examples\", \"image_cube\", \"medium\", \"ang20170323t202244_obs_7000-7010\")\n",
"\n",
"subs_rdn_path = env.path(\"examples\", \"image_cube\", \"medium\", \"input\", \"ang20170323t202244_subs_recon_rdn\")\n",
"subs_loc_path = env.path(\"examples\", \"image_cube\", \"medium\", \"input\", \"ang20170323t202244_subs_recon_loc\")\n",
Expand Down Expand Up @@ -556,9 +556,9 @@
],
"metadata": {
"kernelspec": {
"display_name": "isofit",
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "isofit"
"name": "python3"
},
"language_info": {
"codemirror_mode": {
Expand All @@ -570,7 +570,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.10.8"
"version": "3.10.14"
}
},
"nbformat": 4,
Expand Down
6 changes: 3 additions & 3 deletions image_cube/medium/templates/analytical.args.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
[
"{imagecube}/medium/ang20170323t202244_rdn_7k-8k",
"{imagecube}/medium/ang20170323t202244_loc_7k-8k",
"{imagecube}/medium/ang20170323t202244_obs_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_rdn_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_loc_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_obs_7k-8k",
"{examples}/image_cube/medium",
"ang",
"--surface_path {examples}/image_cube/medium/configs/surface.json",
Expand Down
6 changes: 3 additions & 3 deletions image_cube/medium/templates/default.args.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
[
"{imagecube}/medium/ang20170323t202244_rdn_7k-8k",
"{imagecube}/medium/ang20170323t202244_loc_7k-8k",
"{imagecube}/medium/ang20170323t202244_obs_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_rdn_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_loc_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_obs_7k-8k",
"{examples}/image_cube/medium",
"ang",
"--surface_path {examples}/image_cube/medium/configs/surface.json",
Expand Down
6 changes: 3 additions & 3 deletions image_cube/medium/templates/empirical.args.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
[
"{imagecube}/medium/ang20170323t202244_rdn_7k-8k",
"{imagecube}/medium/ang20170323t202244_loc_7k-8k",
"{imagecube}/medium/ang20170323t202244_obs_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_rdn_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_loc_7k-8k",
"{examples}/image_cube/medium/ang20170323t202244_obs_7k-8k",
"{examples}/image_cube/medium",
"ang",
"--surface_path {examples}/image_cube/medium/configs/surface.json",
Expand Down
6 changes: 3 additions & 3 deletions image_cube/small/templates/analytical.args.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
[
"{imagecube}/small/ang20170323t202244_rdn_7000-7010",
"{imagecube}/small/ang20170323t202244_loc_7000-7010",
"{imagecube}/small/ang20170323t202244_obs_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_rdn_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_loc_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_obs_7000-7010",
"{examples}/image_cube/small",
"ang",
"--surface_path {examples}/image_cube/small/configs/surface.json",
Expand Down
6 changes: 3 additions & 3 deletions image_cube/small/templates/default.args.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
[
"{imagecube}/small/ang20170323t202244_rdn_7000-7010",
"{imagecube}/small/ang20170323t202244_loc_7000-7010",
"{imagecube}/small/ang20170323t202244_obs_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_rdn_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_loc_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_obs_7000-7010",
"{examples}/image_cube/small",
"ang",
"--surface_path {examples}/image_cube/small/configs/surface.json",
Expand Down
6 changes: 3 additions & 3 deletions image_cube/small/templates/empirical.args.json
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
[
"{imagecube}/small/ang20170323t202244_rdn_7000-7010",
"{imagecube}/small/ang20170323t202244_loc_7000-7010",
"{imagecube}/small/ang20170323t202244_obs_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_rdn_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_loc_7000-7010",
"{examples}/image_cube/small/ang20170323t202244_obs_7000-7010",
"{examples}/image_cube/small",
"ang",
"--surface_path {examples}/image_cube/small/configs/surface.json",
Expand Down