Support multiple paths in analyze command

[bsbodden]

Summary

• Accept comma-separated and space-separated paths for mfcqi analyze
• Aggregate metrics across multiple selected paths
• Keep existing single-path behavior unchanged

Closes #2

Tests

• uv run pytest tests/integration/test_cli_integration.py tests/test_analyze_helpers.py -q
• uv run ruff check src/mfcqi/cli/commands/analyze.py src/mfcqi/cli/commands/analyze_helpers.py tests/integration/test_cli_integration.py

[github-actions]

✅ Code Quality Report

Metric	Score	Status
MFCQI Score	0.8710511435045868	✅ Good
Test Coverage	82%	✅ Good
Security Issues	0	✅ Clean

Quality Gates

• MFCQI Score: ✅ Minimum 0.75 (Current: 0.8710511435045868)
• Test Coverage: ✅ Minimum 80% (Current: 82%)
• Security: ✅ Zero vulnerabilities (Current: 0)

🎉 All quality gates passed! This PR maintains high code quality standards.

📊 View detailed MFCQI breakdown

Run mfcqi analyze src/mfcqi locally to see detailed metrics breakdown.

[github-actions]

✅ Code Quality Report

Metric	Score	Status
MFCQI Score	0.8710511435045868	✅ Good
Test Coverage	82%	✅ Good
Security Issues	0	✅ Clean

Quality Gates

• MFCQI Score: ✅ Minimum 0.75 (Current: 0.8710511435045868)
• Test Coverage: ✅ Minimum 80% (Current: 82%)
• Security: ✅ Zero vulnerabilities (Current: 0)

🎉 All quality gates passed! This PR maintains high code quality standards.

📊 View detailed MFCQI breakdown

Run mfcqi analyze src/mfcqi locally to see detailed metrics breakdown.

[github-actions]

✅ MFCQI Score: 0.87 → (±0.000)

➡️ Previous: 0.87

Code quality meets the minimum threshold (0.70).

[github-actions]

✅ Code Quality Report

Metric	Score	Status
MFCQI Score	0.8710511435045868	✅ Good
Test Coverage	82%	✅ Good
Security Issues	0	✅ Clean

Quality Gates

• MFCQI Score: ✅ Minimum 0.75 (Current: 0.8710511435045868)
• Test Coverage: ✅ Minimum 80% (Current: 82%)
• Security: ✅ Zero vulnerabilities (Current: 0)

🎉 All quality gates passed! This PR maintains high code quality standards.

📊 View detailed MFCQI breakdown

Run mfcqi analyze src/mfcqi locally to see detailed metrics breakdown.