v0.3.1

New Functions and Functionality

• Added tbl_roche_subgroups() for subgroup analysis.
• Added g_forest to create forest plot.

What's Changed

• kmg plot by @shajoezhu in #141
• Forest plot by @shajoezhu in #144
• Fix main fail by @shajoezhu in #149
• 157 cran failing fix by @shajoezhu in #158
• preparing for release 0.3.0, [skip vbump] by @shajoezhu in #146

Full Changelog: v0.3.0...v0.3.1

v0.3.0

New Functions and Functionality

• Added tbl_null_report() for cases without any information to display. (#11)
• Added functions style_roche_number() and label_roche_number() to replace their respective gtsummary versions, with additional inf argument for customization of Inf/-Inf/NaN values.
• Added list("assign_summary_type-arg:cat_threshold" = 0L) to theme_gtsummary_roche(). Numeric variables with few levels will no longer default to summary type 'categorical' in gtsummary::tbl_summary() and tbl_roche_summary(). (#79)

Other Updates

• Updated variable processing in tbl_baseline_chg() to allow for non-string input. (#114)
• Updated details about the sort_hierarchical() and filter_hierarchical() functions in the hierarchical tables article. (#116)
• Added the label argument to tbl_hierarchical_rate_and_count() to set hierarchy variables labels in the table header. (#118)

Bug Fixes

• Fixed remove_duplicate_keys() to remove non-unique column values when the key columns are a mix of unique and duplicated entries. (#129)

What's Changed

• Update variable processing in tbl_baseline_chg() to allow non-string input by @edelarua in #115
• Update hierarchical table article by @edelarua in #117
• Add label parameter to tbl_hierarchical_rate_and_count() by @edelarua in #119
• Remove bold formatting from Roche theme by @edelarua in #121
• add style_roche_number and laber_roche_number functions by @ayogasekaram in #122
• Addition of tbl_null_report() for cases without any statistic output row by @Melkiades in #125
• faster sorting by @Melkiades in #126
• Remove type casting to factor when few values (numeric) by @Melkiades in #124
• 127 style number@main by @ayogasekaram in #128
• Fix remove duplicated lines for unique values by @Melkiades in #130
• replace pharmaverse ADLB dataset with cards by @ayogasekaram in #123
• Set default digits for tbl_roche_summary() by @edelarua in #139
• update readme, adding license by @shajoezhu in #140
• Add add_difference_row.tbl_survfit_times for survival difference rows by @edelarua in #132

New Contributors

• @shajoezhu made their first contribution in #140

Full Changelog: v0.2.0...v0.3.0

v0.2.0

New Functions and Functionality

• The tbl_demographics() function has been renamed to tbl_roche_summary() with the following updates. (#73).

  • Updated tbl_roche_summary() to convert cells with "0 (0.0%)" to "0".

  • Update the tbl_roche_summary() returned inputs list to match the tbl_roche_summary() argument inputs, whereas it previously returned the tbl_summary() inputs. (#31)

  • Changed the default header in tbl_roche_summary() tables from **Characteristic** to an empty string.

  • Fix in tbl_roche_summary() when a variable is all NA within a stratum. The zero count was displayed as "0 (NA%)" instead of "0". (#60)

• Added function tbl_hierarchical_rate_by_grade() to summarize adverse event rates by highest toxicity grade. (#46)
• Adding the modify_zero_recode() function that recodes "0 (0.0%)" to "0" in summary tables.
• Adding the modify_header_rm_md() function to remove bold and italic markdown syntax from the headers of a gtsummary table. (#53)
• Adding tbl_hierarchical_rate_and_count() and associated S3 method add_overall() to summarize hierarchical event rates and counts. (#36)
• Added tbl_survfit_quantiles() and add_overall.tbl_survfit_quantiles() to create a table of survival quantiles. (#19)
• Adding tbl_survfit_times() and add_overall.tbl_survfit_times()
• Adding tbl_baseline_chg() function. (#62)
• Added function tbl_shift() for easing the creation of shift tables. (#83)
• Added style_roche_percent() and label_roche_percent() functions.
• Added formatting functions style_roche_ratio() and label_roche_ratio(). (#91)
• Added variables and row_numbers arguments to the add_blank_rows() function. (#45)
• Re-coding 0 / 0 (NA%) to 0 / 0 in modify_zero_recode(). (#85)

Other Updates

• Added an article giving an overview of the {crane} package. (#37)
• The {gtsummary} is now loaded with {crane}.
• Updated Roche theme to bold headers for flextable outputs.
• Updated Roche theme to include parentheses around Ns in header, and updated function defaults to include the parentheses in crane functions.
• Updated theme_gtsummary_roche() to further style results from gtsummary::tbl_hierarchical*() functions.
• Added theme_gtsummary_roche(font_size, print_egine) arguments to control the default font size and the print engine.
• Updated Roche theme to use style_roche_percent() as the default function to format percentages.
• Added additional {flextable} specs for theme_gtsummary_roche(). Mainly border line width (0.5) and footer font size (font_size - 1).

What's Changed

• Update scheduled.yaml by @ddsjoberg in #2
• add files for repo to match nest style by @ayogasekaram in #3
• setting up testing by @ddsjoberg in #15
• Adding startup messaging by @ddsjoberg in #10
• Release prep [skip vbump] by @ddsjoberg in #22
• Adding add_overall() by @ddsjoberg in #32
• Attaching cards and cardx with crane by @ddsjoberg in #34
• Adding tbl_survfit_quantiles() by @ddsjoberg in #23
• Add flx docx theme by @Melkiades in #35
• Add introduction article by @edelarua in #39
• adding new tests by @ddsjoberg in #42
• update forcats standalone script by @ayogasekaram in #44
• Add hierarchical tables/stratified nested tables article by @edelarua in #40
• Added add_overall.tbl_survfit_quantiles() by @ddsjoberg in #49
• Add roche_pvalue() unit tests by @ddsjoberg in #51
• Addingtbl_survfit_times() by @ddsjoberg in #50
• Adding tbl_ae_rate_and_count() by @ddsjoberg in #47
• Adding strip_md_bold() and strip_md_italic() by @ddsjoberg in #54
• Updates for tbl_hierarchical_rate_and_count() by @ddsjoberg in #56
• add reference section for crane functions by @ayogasekaram in #58
• Addressing 0 (NA%) recoding issue by @ddsjoberg in #61
• Adding modify_header_rm_md() by @ddsjoberg in #64
• Adding modify_zero_recode() by @ddsjoberg in #66
• Header Updates by @ddsjoberg in #67
• accounting for add_overall() in add_hierarchical_count_row() by @ddsjoberg in #70
• Adding ARD to add_hierarchical_count_row() by @ddsjoberg in #71
• Rename tbl_demographics() by @ddsjoberg in #74
• add roche_percent() function by @ayogasekaram in #68
• Adding theme arguments by @ddsjoberg in #76
• update theme for hierarchical tables by @ddsjoberg in #78
• Addition of row_numbers and explicit defaults for add_blank_rows by @Melkiades in #75
• Update digits to NULL in tbl_hierarchical_rate_and_count by @ayogasekaram in #82
• Add tbl_hierarchical_rate_by_grade() by @edelarua in #52
• chore: Add CI pipeline for internal sync by @cicdguy in #87
• Adding tbl_shift() by @ddsjoberg in #84
• Add parentheses around Ns by @ddsjoberg in #90
• Add parentheses to hard-coded header N strings by @edelarua in #95
• Bolding headers by @Melkiades in #100
• Adding add_hierarchical_count_row(data_process) argument by @ddsjoberg in #102
• modify_zero_recode() to recode 0 / nn (0%) to 0 / nn by @ddsjoberg in #103
• cards fn rename updates by @ddsjoberg in #105
• fix fontsize by @Melkiades in #104
• change from baseline function draft by @ayogasekaram in #65
• add gtsummary prefix by @ayogasekaram in #109
• Adding add_blank_row(variable_level) argument by @ddsjoberg in #110
• tbl_listing() Review Proposed Updates by @ddsjoberg in #111
• Adding *roche_ratio() functions by @ddsjoberg in #112

New Contributors

• @ayogasekaram made their first contribution in #3
• @Melkiades made their first contribution in #35
• @edelarua made their first contribution in #39
• @cicdguy made their first contribution in #87

Full Changelog: https://github.com/insightsengineering/crane/commits/v0.2.0