https://apps-afsc.fisheries.noaa.gov/REFM/docs/2018/BSAI/2018EBSpollock.pdf
Install the icesTAF package, version >=2.1 from CRAN.
Then open R in the 2018_ebs-pollock directory and run:
library(icesTAF)
taf.bootstrap()
sourceAll()
Instead of sourceAll one can run
makeAll()
to only run scripts as needed.