Molecular Evolution

This project takes in a number of individuals "N", a length of genome sequence "L", a rate of mutation "µ", a total number of generations "G", and a time point for a speciation event "g".

It then uses this information to create a species of haploid individuals that will reproduce over G generations with each offspring having matching genome sequences to the parent but with the addition of a mutation function that will change specific nucleotides to mimic natural mutatation.

Then, the average genetic distance is calculated and stored. This genetic distance function is currently simplificed and will be improved upon.