Releases · galaxyproject/tpv-shared-database

Initial release

What's Changed

Some rules from usegalaxy-au/infrastructure by @cat-bro in #1
add some documentation by @bgruening in #4
Github workflow to run tpv lint on tools.yml by @cat-bro in #7
fix linter by @cat-bro in #8
commit of translated eu tools by @cat-bro in #3
Make sure that tpv format has been run prior to checking in the tool … by @nuwang in #9
Update requirements for tpv lint by @nuwang in #12
Added dash rule by @mira-miracoli in #10
Remove gpu tag as we can specify gpus directly as a resource requirement by @nuwang in #13
Add some more tools from GA config by @cat-bro in #11
Update database from our tool_destinations.yml by @mira-miracoli in #14
adjust hifiasm for small inputs by @bgruening in #15
Updates from usegalaxy.eu's dynamic tool destinations file by @mira-miracoli in #17
Add tools from usegalaxy.eu by @kysrpex in #19
Remove -XX:MaxPermSize from _JAVA_OPTIONS for all tools by @cat-bro in #22
Pin galaxy-app <= 22.1.1 in linter requirements by @cat-bro in #27
Fix antismash ID regex by @cat-bro in #26
input_size based rules for anndata_import tool by @pavanvidem in #24
Reduce allocation for featurecounts to 2c 8g by @cat-bro in #29
add pepquery2 by @mira-miracoli in #31
increase to 20G by @mira-miracoli in #32
added aplcms_align_features to tools,yaml by @hechth in #33
Add entry for bellerophon by @cat-bro in #34
hypo increase mem by @mira-miracoli in #20
kraken2 updates from EU by @bgruening in #35
Add entries for some tools running out of memory with default settings on Galaxy Australia by @cat-bro in #37
Increase allocations for funannotate_annotate and fasttree by @cat-bro in #38
Update memory for bandage_image and bandage_info by @cat-bro in #39
Add threads and RAM for funannotate_clean by @TomHarrop in #40
more memory for funannotate_clean by @cat-bro in #42
more mem for funannotate_clean by @TomHarrop in #44
Hybpiper 8 cores by @TomHarrop in #45
Add some more tools running out of memory with default cores/mem on GA by @cat-bro in #46
add drep by @bgruening in #43
Try unpinning galaxy-app in linter requirements by @cat-bro in #50
funannotate_annotate RAM by @TomHarrop in #51
Add entry for tetoolkit by @cat-bro in #54
add TERM to lotus2 by @bgruening in #52
add entry for bio3d_pca_visualize by @cat-bro in #49
increase mem for masurca_simple by @cat-bro in #58
pin many galaxy packages for lint workflow by @cat-bro in #59
Add default resource params and slurm destination by @nuwang in #61
Revert "Add default resource params and slurm destination" by @nuwang in #62
Limit maaslin2 1.16.0 to 1 core by @paulzierep in #65
Bump ram for microsatbed to 8GB by @fubar2 in #66
Updated recetox tools which require docker containers by @hechth in #67
Add more tools from Galaxy Australia TPV config by @cat-bro in #69
Restore reverted "Add default resource params and slurm destination"" by @nuwang in #63
more memory and fewer cores for mirdeep2 by @cat-bro in #70
Remove clustalw, set fixed raxml memory by @natefoo in #72
add a rule to interproscan for more memory by @bgruening in #57
Add mem for all tools with cores and rescale some memory based on usegalaxy.org usage by @natefoo in #76
increase memory for lotus2 by @cat-bro in #68
Add requirements for the Galaxy-ME tools by @afgane in #77
Ease local runner use. by @jmchilton in #80
Remove rank function by @nuwang in #82
Add music_construct_eset mem by @pavanvidem in #84
Add/changes some mem values by @SantaMcCloud in #81
Update tools.yml with recetox and ms tools by @hechth in #47