Integration test for --fastq_output and --suppress_plots#89
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Colelyman
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Mar 4, 2026
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This looks good, one thing that would be good before we merge this in is setting up diffing of the fastq output file. I think the cleanest way to do it would be to unzip the CRISPResso_output.fastq.gz file and run the regular text diff on that.
@claude will you implement this change?
Colelyman
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Mar 6, 2026
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