Sync db and dev branches
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GiottoClass v0.4.0
GiottoClass 0.4.1
GiottoClass 0.4.2 - hotfix `makePseudoVisium()`
chore: update news
GiottoClass v0.4.3 hotfix cell metadata desync
GiottoClass 0.4.4 hotfixes for affine image save/loads
change exprDT[, genes := as.character(rep(x = geneDT$gene, geneDT$count))] to exprDT[, genes := as.character(rep(x = geneDT$geneName, geneDT$count))]
change exprDT[, genes := as.character(rep(x = geneDT$gene, geneDT$count))] to exprDT[, genes := as.character(rep(x = geneDT$geneName, geneDT$count))] same problem as last time
process duplicated gene symbols
Update interoperability.R
GiottoClass 0.4.6
GiottoClass 0.4.7
hotfix: `loadGiotto()` and `createGiottoPolygon()`
feat: composable data processing framework
enh: compatiblity and spatial querying improvements
hotfix: terra 1.8.50 deprecations
hotfix for `loadGiotto()` and `joinGiotto()`
enh: `as.matrix()` for `nnNetObj`
fix: irregular x shift in join
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… mixing with terra-backed inputs
![github-advanced-security[bot]](https://avatars.githubusercontent.com/in/57789?s=60&v=4){kind=small}
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| if (isTRUE(return_gpolygon)) { | ||
| if (is.null(name_overlap)) name_overlap <- objName(y) |
Check warning
Code scanning / lintr
no visible global function definition for 'objName' Warning
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