-
Notifications
You must be signed in to change notification settings - Fork 22
CYCLO70 Benchmark #252
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Open
kuryla
wants to merge
13
commits into
ddmms:main
Choose a base branch
from
kuryla:cyclo70
base: main
Could not load branches
Branch not found: {{ refName }}
Loading
Could not load tags
Nothing to show
Loading
Are you sure you want to change the base?
Some commits from the old base branch may be removed from the timeline,
and old review comments may become outdated.
Open
CYCLO70 Benchmark #252
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
d99dda7 to
a1519f5
Compare
|
|
||
| model_dir = DATA_PATH / MODELS[0] | ||
| if model_dir.exists(): | ||
| labels = sorted([f.stem for f in model_dir.glob("*.xyz")]) |
Collaborator
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
I think this has the same problem as #256, where either we need the glob to be more specific, or we could write the structures to the same file if they're all useful to visualise
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Pre-review checklist for PR author
PR author must check the checkboxes below when creating the PR.
Summary
CYCLO70 dataset for pericyclic reaction barriers.
CYCLO70: A New Challenging Pericyclic Benchmarking Set for Kinetics
and Thermochemistry Evaluation
Javier E. Alfonso-Ramos, Carlo Adamo, Éric Brémond, and Thijs Stuyver
Journal of Chemical Theory and Computation 2025 21 (18), 8907-8917
DOI: 10.1021/acs.jctc.5c00925
Linked issue
Resolves #
Progress
Testing
MACE-OMOL, MACE-OMOL-LR, ORBMOL
New decorators/callbacks