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Bugfix/models variant#181

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erinaldidb merged 13 commits intomainfrom
bugfix/models_variant
Feb 17, 2026
Merged

Bugfix/models variant#181
erinaldidb merged 13 commits intomainfrom
bugfix/models_variant

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@erinaldidb erinaldidb commented Feb 12, 2026

Summary

This PR addresses compatibility issues with VARIANT data types in model serving and metadata extraction, alongside updates to the VISTA3D notebook and de-identification workflows.

Key Changes

Variant Type Casting: Explicitly casts series_uid and metadata fields from VARIANT to STRING (using ::STRING) in monailabel_model/ModelServing.py. This ensures correct filtering, SQL querying, and compatibility with the underlying schema.

De-identification Workflow: Updates 03-Metadata-DeIdentification.py to enable zip extraction (extractZip=True) during the cataloging phase.

VISTA3D Updates: Refreshes monailabel_model/VISTA3D.ipynb, including configuration updates for Service Principals and volume handling.

MONAI 1.5.2: Includes various style fixes, performance improvements to the writer, and migration scripts for variant compatibility and latest dicom -> inference -> dicom-seg model path.

@erinaldidb erinaldidb requested a review from dmoore247 February 15, 2026 06:40
@erinaldidb erinaldidb merged commit 331a051 into main Feb 17, 2026
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@erinaldidb erinaldidb deleted the bugfix/models_variant branch February 17, 2026 17:15
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