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e3make3d_gauss now can generate a score for each particle, producing a Tag new version #354: Commit be407dd pushed by sludtke42
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numpy2 fix Tag new version #353: Commit 190bd1f pushed by sludtke42
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Replacing SNR weighting with jax_frc_jit_new weighting scheme (includ… Tag new version #352: Commit 9cf8e58 pushed by AnyaPorter
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Merge conflict: Symmetry and new jax_frc_jit_new (only in CTF0 still … Tag new version #351: Commit 7f5bb1a pushed by AnyaPorter
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Batch size modified by symmetry. With JAX >=0.7 this can use a much l… Tag new version #350: Commit 09a7315 pushed by sludtke42
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Fix unintended commit in e2proclst. New option should function proper… Tag new version #349: Commit 9e946dd pushed by sludtke42
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oops, accidentally pasted an option from another program Tag new version #348: Commit acdd1bc pushed by sludtke42
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oops, last commit was incomplete. Not sure if the ort refinement is w… Tag new version #347: Commit 4ebd1bb pushed by sludtke42
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Testing new threshold scheme in e3spa_refine_gauss Tag new version #346: Commit f0832b4 pushed by sludtke42
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Reinstated symmetry enforcement during e3make3d_gauss in e2spa_refine… Tag new version #345: Commit 89f22bf pushed by sludtke42
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Ok, the new energy strategy is working fairly well now. it uses a std… Tag new version #344: Commit 58f7120 pushed by sludtke42
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added new weighting scheme to e3spa_refine_gauss, but only for ctf=0 Tag new version #343: Commit 9d9954f pushed by sludtke42
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Merge branch 'master' of https://github.com/cryoem/eman2 Tag new version #342: Commit ba7678b pushed by g5v991x
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[ci build] Tag new version #341: Commit 300a2c7 pushed by sludtke42
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First runnable version of e3simulate_data.py. Still not quite complete Tag new version #340: Commit b69b2cd pushed by sludtke42
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Minor fixes Tag new version #339: Commit 76b4db0 pushed by sludtke42
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Merge branch 'master' of https://github.com/cryoem/eman2 Tag new version #338: Commit a6f1ccc pushed by g5v991x
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Merge branch 'symmetry' Tag new version #337: Commit 72f294e pushed by AnyaPorter
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Merge branch 'master' of https://github.com/cryoem/eman2 Tag new version #336: Commit 543176c pushed by g5v991x
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This is to combat an issue a user encountered related to a 'from nump… Tag new version #335: Commit 72d3811 pushed by sludtke42
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started e3proclst.py. ATM it just does conversion of EMAN2 style .lst… Tag new version #334: Commit cf124b1 pushed by sludtke42
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Doc fix Tag new version #333: Commit 408c1fd pushed by sludtke42
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We had decided not to include a min(j+batchsize,nptcl) so removing th… Tag new version #332: Commit 771080b pushed by AnyaPorter
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new option to add preclip to 3d gaussian reconstruction for more effi… Tag new version #331: Commit 4873357 pushed by sludtke42
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Fixing index 0 as start for caching instead of i, read doesn't need m… Tag new version #330: Commit 350141b pushed by AnyaPorter
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