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Modification in DESeq2 lfcShrink function to keep consistency with p-values from results function

Status: Open.

#17 In cnio-bu/cluster_rnaseq;

· ELENAPINEIRO opened on Jul 31, 2023

include mycoplasma genomes in fastq_screen analysis

Status: Open.

#16 In cnio-bu/cluster_rnaseq;

· jmzvillarreal opened on Jul 18, 2023

Error when annotating the GeneSymbol from the ENSEMBL Gene ID (Only human)

Status: Open.

#15 In cnio-bu/cluster_rnaseq;

· lserranor opened on Jul 12, 2023

Filtering out low count genes

Status: Open.

#12 In cnio-bu/cluster_rnaseq;

· mj-jimenez opened on Apr 12, 2023

Error when plotting the heatmap of DEGs

Status: Open.

#9 In cnio-bu/cluster_rnaseq;

· mj-jimenez opened on Feb 23, 2023

Save variance stabilized normalized counts

Status: Open.

#8 In cnio-bu/cluster_rnaseq;

· mj-jimenez opened on Feb 23, 2023

Setting diffexp column as False for all samples in samples.tsv not supported

Status: Open.

#7 In cnio-bu/cluster_rnaseq;

· jlanillos opened on Nov 8, 2022

Error in deseq_init.R when selecting the samples for differential expression

Status: Open.

#6 In cnio-bu/cluster_rnaseq;

· mj-jimenez opened on Sep 8, 2022