A draft of a simple module to discuss `nf-core`#1

Draft

Claptar wants to merge 23 commits intomainfrom

anndatautils_toh5ad

Commits on Apr 30, 2025

add ANNDATAUTILS_TOH5AD module with configuration and metadata
cellgeni
committed
refactor input type in meta.yml and add initial tests for ANNDATAUTILS_TOH5AD module
cellgeni
committed
refactor meta.yml by removing unused tool entries and cleaning up input structure
cellgeni
committed

Commits on May 1, 2025

add convert_to_h5ad script for loading and saving AnnData objects with validation
cellgeni
committed
add Dockerfile for setting up Python environment with necessary dependencies
cellgeni
committed
Add raw data files and update tests for h5ad conversion
cellgeni
committed
Enhance ANNDATAUTILS_TOH5AD process to emit versions.yml and h5ad output
cellgeni
committed
Refactor meta.yml to standardize keywords and improve input descriptions for clarity
cellgeni
committed
Update ANNDATAUTILS_TOH5AD process to use wildcard for name matching and remove container specification
cellgeni
committed

Commits on May 2, 2025