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fix(rpextractsink): handle cmpd info not found from URL #48

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Merged
tduigou merged 1 commit into from
Jan 5, 2026
Merged

fix(rpextractsink): handle cmpd info not found from URL #48

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8 changes: 6 additions & 2 deletions rptools/rpextractsink/rpextractsink.py
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Original file line number Diff line number Diff line change
Expand Up @@ -155,8 +155,12 @@ def get_inchi_from_crossid(
logger.debug('Server is still too busy after multiple attempts. Aborting retrieval.')
return ''
logger.debug(f'Final page content after retries: {page.text}')
url_crossid = re_search(r'/chem_info/\w+', page.text).group()
return get_inchi_from_url(f'{url_mnx}{url_crossid}', logger)
try:
url_crossid = re_search(r'/chem_info/\w+', page.text).group()
return get_inchi_from_url(f'{url_mnx}{url_crossid}', logger)
except Exception as e:
logger.debug(f'Error retrieving InChI from URL: {e}')
return ''


def get_inchi_from_url(
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