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Merged
daichengxin merged 1 commit into from
Jun 18, 2026
Merged

unified name #43

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4 changes: 2 additions & 2 deletions modules/bigbio/onsite/main.nf
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Original file line number Diff line number Diff line change
Expand Up @@ -72,8 +72,8 @@ process ONSITE {
fragment_unit = params.onsite_fragment_error_units ?: 'Da'
def fragment_method = params.onsite_fragment_method ?: 'CID'
def min_mz = params.onsite_min_mz ?: '150.0'
def max_charge = params.onsite_max_charge_state ?: '5'
def max_peptide_len = params.onsite_max_peptide_length ?: '40'
def max_charge = params.max_precursor_charge ?: '5'
def max_peptide_len = params.max_peptide_length ?: '40'
def max_num_perm = params.onsite_max_num_perm ?: '16384'
def modeling_threshold = params.onsite_modeling_score_threshold ?: '0.95'
def scoring_threshold = params.onsite_scoring_threshold ?: '0.0'
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